ebv infected cell lines Search Results


ebv transfected lymphoblastoid cell lines  (Coriell Institute for Medical Research)
90
Coriell Institute for Medical Research ebv transfected lymphoblastoid cell lines
Flowchart and overview of DMRforPairs results of the Illumina data. (A) The subsequent steps of recoding probe classes, identifying regions, quantifying and testing methylation differences and exporting the results are described in detail in the main text. Briefly, 473,151 probes remained after quality control. Subsequently, probes not associated to any of the 11 classes or not included in any of the regions are discarded. 145,537 probes (35%) were included in 29,404 potential regions of interest. Finally, these were assessed for methylation differences. (B) Number of regions identified in the various pairwise analyses. * = relevant indicates regions with |ΔM| > 1.4, ** = significant indicates relevant + p adjusted ≤ 0.05. “repl.” indicates technical replicates. (C,D) The density plots illustrate the distribution of all/the relevant/the significant regions with regard to the number of probes in each region. Only the comparisons of the two cancer cell lines (C) and the pair of <t>lymphoblastoid</t> cell lines (D) are depicted as the technical replicates yielded no significant DMRs.
Ebv Transfected Lymphoblastoid Cell Lines, supplied by Coriell Institute for Medical Research, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/ebv transfected lymphoblastoid cell lines/product/Coriell Institute for Medical Research
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epstein–barr virus ebv-infected cell lysate  (Virusys Inc)
90
Virusys Inc epstein–barr virus ebv-infected cell lysate
Flowchart and overview of DMRforPairs results of the Illumina data. (A) The subsequent steps of recoding probe classes, identifying regions, quantifying and testing methylation differences and exporting the results are described in detail in the main text. Briefly, 473,151 probes remained after quality control. Subsequently, probes not associated to any of the 11 classes or not included in any of the regions are discarded. 145,537 probes (35%) were included in 29,404 potential regions of interest. Finally, these were assessed for methylation differences. (B) Number of regions identified in the various pairwise analyses. * = relevant indicates regions with |ΔM| > 1.4, ** = significant indicates relevant + p adjusted ≤ 0.05. “repl.” indicates technical replicates. (C,D) The density plots illustrate the distribution of all/the relevant/the significant regions with regard to the number of probes in each region. Only the comparisons of the two cancer cell lines (C) and the pair of <t>lymphoblastoid</t> cell lines (D) are depicted as the technical replicates yielded no significant DMRs.
Epstein–Barr Virus Ebv Infected Cell Lysate, supplied by Virusys Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/epstein–barr virus ebv-infected cell lysate/product/Virusys Inc
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ebv-negative npc cell lines cne-1  (China Center for Type Culture Collection)
90
China Center for Type Culture Collection ebv-negative npc cell lines cne-1
Flowchart and overview of DMRforPairs results of the Illumina data. (A) The subsequent steps of recoding probe classes, identifying regions, quantifying and testing methylation differences and exporting the results are described in detail in the main text. Briefly, 473,151 probes remained after quality control. Subsequently, probes not associated to any of the 11 classes or not included in any of the regions are discarded. 145,537 probes (35%) were included in 29,404 potential regions of interest. Finally, these were assessed for methylation differences. (B) Number of regions identified in the various pairwise analyses. * = relevant indicates regions with |ΔM| > 1.4, ** = significant indicates relevant + p adjusted ≤ 0.05. “repl.” indicates technical replicates. (C,D) The density plots illustrate the distribution of all/the relevant/the significant regions with regard to the number of probes in each region. Only the comparisons of the two cancer cell lines (C) and the pair of <t>lymphoblastoid</t> cell lines (D) are depicted as the technical replicates yielded no significant DMRs.
Ebv Negative Npc Cell Lines Cne 1, supplied by China Center for Type Culture Collection, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/ebv-negative npc cell lines cne-1/product/China Center for Type Culture Collection
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human t cell clone bc3  (Astarte Biologics)
90
Astarte Biologics human t cell clone bc3
Flowchart and overview of DMRforPairs results of the Illumina data. (A) The subsequent steps of recoding probe classes, identifying regions, quantifying and testing methylation differences and exporting the results are described in detail in the main text. Briefly, 473,151 probes remained after quality control. Subsequently, probes not associated to any of the 11 classes or not included in any of the regions are discarded. 145,537 probes (35%) were included in 29,404 potential regions of interest. Finally, these were assessed for methylation differences. (B) Number of regions identified in the various pairwise analyses. * = relevant indicates regions with |ΔM| > 1.4, ** = significant indicates relevant + p adjusted ≤ 0.05. “repl.” indicates technical replicates. (C,D) The density plots illustrate the distribution of all/the relevant/the significant regions with regard to the number of probes in each region. Only the comparisons of the two cancer cell lines (C) and the pair of <t>lymphoblastoid</t> cell lines (D) are depicted as the technical replicates yielded no significant DMRs.
Human T Cell Clone Bc3, supplied by Astarte Biologics, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/human t cell clone bc3/product/Astarte Biologics
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akata‑ebv‑egfp cells  (JCRB Cell Bank)
90
JCRB Cell Bank akata‑ebv‑egfp cells
Flowchart and overview of DMRforPairs results of the Illumina data. (A) The subsequent steps of recoding probe classes, identifying regions, quantifying and testing methylation differences and exporting the results are described in detail in the main text. Briefly, 473,151 probes remained after quality control. Subsequently, probes not associated to any of the 11 classes or not included in any of the regions are discarded. 145,537 probes (35%) were included in 29,404 potential regions of interest. Finally, these were assessed for methylation differences. (B) Number of regions identified in the various pairwise analyses. * = relevant indicates regions with |ΔM| > 1.4, ** = significant indicates relevant + p adjusted ≤ 0.05. “repl.” indicates technical replicates. (C,D) The density plots illustrate the distribution of all/the relevant/the significant regions with regard to the number of probes in each region. Only the comparisons of the two cancer cell lines (C) and the pair of <t>lymphoblastoid</t> cell lines (D) are depicted as the technical replicates yielded no significant DMRs.
Akata‑Ebv‑Egfp Cells, supplied by JCRB Cell Bank, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/akata‑ebv‑egfp cells/product/JCRB Cell Bank
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ebv-immortalized b lymphocyte cell lines  (Coriell Institute for Medical Research)
90
Coriell Institute for Medical Research ebv-immortalized b lymphocyte cell lines
Flowchart and overview of DMRforPairs results of the Illumina data. (A) The subsequent steps of recoding probe classes, identifying regions, quantifying and testing methylation differences and exporting the results are described in detail in the main text. Briefly, 473,151 probes remained after quality control. Subsequently, probes not associated to any of the 11 classes or not included in any of the regions are discarded. 145,537 probes (35%) were included in 29,404 potential regions of interest. Finally, these were assessed for methylation differences. (B) Number of regions identified in the various pairwise analyses. * = relevant indicates regions with |ΔM| > 1.4, ** = significant indicates relevant + p adjusted ≤ 0.05. “repl.” indicates technical replicates. (C,D) The density plots illustrate the distribution of all/the relevant/the significant regions with regard to the number of probes in each region. Only the comparisons of the two cancer cell lines (C) and the pair of <t>lymphoblastoid</t> cell lines (D) are depicted as the technical replicates yielded no significant DMRs.
Ebv Immortalized B Lymphocyte Cell Lines, supplied by Coriell Institute for Medical Research, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/ebv-immortalized b lymphocyte cell lines/product/Coriell Institute for Medical Research
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ebv-immortalized b lymphocyte cell lines - by Bioz Stars, 2026-06
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champ1 patient lymphocyte cell lines  (Coriell Institute for Medical Research)
90
Coriell Institute for Medical Research champ1 patient lymphocyte cell lines
Flowchart and overview of DMRforPairs results of the Illumina data. (A) The subsequent steps of recoding probe classes, identifying regions, quantifying and testing methylation differences and exporting the results are described in detail in the main text. Briefly, 473,151 probes remained after quality control. Subsequently, probes not associated to any of the 11 classes or not included in any of the regions are discarded. 145,537 probes (35%) were included in 29,404 potential regions of interest. Finally, these were assessed for methylation differences. (B) Number of regions identified in the various pairwise analyses. * = relevant indicates regions with |ΔM| > 1.4, ** = significant indicates relevant + p adjusted ≤ 0.05. “repl.” indicates technical replicates. (C,D) The density plots illustrate the distribution of all/the relevant/the significant regions with regard to the number of probes in each region. Only the comparisons of the two cancer cell lines (C) and the pair of <t>lymphoblastoid</t> cell lines (D) are depicted as the technical replicates yielded no significant DMRs.
Champ1 Patient Lymphocyte Cell Lines, supplied by Coriell Institute for Medical Research, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/champ1 patient lymphocyte cell lines/product/Coriell Institute for Medical Research
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champ1 patient lymphocyte cell lines - by Bioz Stars, 2026-06
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hapmap epstein-barr virus (ebv)-transformed lymphoblastoid cell lines  (Coriell Institute for Medical Research)
90
Coriell Institute for Medical Research hapmap epstein-barr virus (ebv)-transformed lymphoblastoid cell lines
Flowchart and overview of DMRforPairs results of the Illumina data. (A) The subsequent steps of recoding probe classes, identifying regions, quantifying and testing methylation differences and exporting the results are described in detail in the main text. Briefly, 473,151 probes remained after quality control. Subsequently, probes not associated to any of the 11 classes or not included in any of the regions are discarded. 145,537 probes (35%) were included in 29,404 potential regions of interest. Finally, these were assessed for methylation differences. (B) Number of regions identified in the various pairwise analyses. * = relevant indicates regions with |ΔM| > 1.4, ** = significant indicates relevant + p adjusted ≤ 0.05. “repl.” indicates technical replicates. (C,D) The density plots illustrate the distribution of all/the relevant/the significant regions with regard to the number of probes in each region. Only the comparisons of the two cancer cell lines (C) and the pair of <t>lymphoblastoid</t> cell lines (D) are depicted as the technical replicates yielded no significant DMRs.
Hapmap Epstein Barr Virus (Ebv) Transformed Lymphoblastoid Cell Lines, supplied by Coriell Institute for Medical Research, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/hapmap epstein-barr virus (ebv)-transformed lymphoblastoid cell lines/product/Coriell Institute for Medical Research
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ebv-positive npc cell line c666-1  (Coriell Institute for Medical Research)
90
Coriell Institute for Medical Research ebv-positive npc cell line c666-1
Flowchart and overview of DMRforPairs results of the Illumina data. (A) The subsequent steps of recoding probe classes, identifying regions, quantifying and testing methylation differences and exporting the results are described in detail in the main text. Briefly, 473,151 probes remained after quality control. Subsequently, probes not associated to any of the 11 classes or not included in any of the regions are discarded. 145,537 probes (35%) were included in 29,404 potential regions of interest. Finally, these were assessed for methylation differences. (B) Number of regions identified in the various pairwise analyses. * = relevant indicates regions with |ΔM| > 1.4, ** = significant indicates relevant + p adjusted ≤ 0.05. “repl.” indicates technical replicates. (C,D) The density plots illustrate the distribution of all/the relevant/the significant regions with regard to the number of probes in each region. Only the comparisons of the two cancer cell lines (C) and the pair of <t>lymphoblastoid</t> cell lines (D) are depicted as the technical replicates yielded no significant DMRs.
Ebv Positive Npc Cell Line C666 1, supplied by Coriell Institute for Medical Research, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/ebv-positive npc cell line c666-1/product/Coriell Institute for Medical Research
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tmlcl ebv-transformed lymphoblastoid cell line  (Biochrom)
90
Biochrom tmlcl ebv-transformed lymphoblastoid cell line
Flowchart and overview of DMRforPairs results of the Illumina data. (A) The subsequent steps of recoding probe classes, identifying regions, quantifying and testing methylation differences and exporting the results are described in detail in the main text. Briefly, 473,151 probes remained after quality control. Subsequently, probes not associated to any of the 11 classes or not included in any of the regions are discarded. 145,537 probes (35%) were included in 29,404 potential regions of interest. Finally, these were assessed for methylation differences. (B) Number of regions identified in the various pairwise analyses. * = relevant indicates regions with |ΔM| > 1.4, ** = significant indicates relevant + p adjusted ≤ 0.05. “repl.” indicates technical replicates. (C,D) The density plots illustrate the distribution of all/the relevant/the significant regions with regard to the number of probes in each region. Only the comparisons of the two cancer cell lines (C) and the pair of <t>lymphoblastoid</t> cell lines (D) are depicted as the technical replicates yielded no significant DMRs.
Tmlcl Ebv Transformed Lymphoblastoid Cell Line, supplied by Biochrom, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/tmlcl ebv-transformed lymphoblastoid cell line/product/Biochrom
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ebv-negative npc-derived cell line hone1  (Lonza)
90
Lonza ebv-negative npc-derived cell line hone1
Flowchart and overview of DMRforPairs results of the Illumina data. (A) The subsequent steps of recoding probe classes, identifying regions, quantifying and testing methylation differences and exporting the results are described in detail in the main text. Briefly, 473,151 probes remained after quality control. Subsequently, probes not associated to any of the 11 classes or not included in any of the regions are discarded. 145,537 probes (35%) were included in 29,404 potential regions of interest. Finally, these were assessed for methylation differences. (B) Number of regions identified in the various pairwise analyses. * = relevant indicates regions with |ΔM| > 1.4, ** = significant indicates relevant + p adjusted ≤ 0.05. “repl.” indicates technical replicates. (C,D) The density plots illustrate the distribution of all/the relevant/the significant regions with regard to the number of probes in each region. Only the comparisons of the two cancer cell lines (C) and the pair of <t>lymphoblastoid</t> cell lines (D) are depicted as the technical replicates yielded no significant DMRs.
Ebv Negative Npc Derived Cell Line Hone1, supplied by Lonza, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/ebv-negative npc-derived cell line hone1/product/Lonza
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genomic dna samples from six ebv-transformed b-lymphocyte cell lines  (Coriell Institute for Medical Research)
90
Coriell Institute for Medical Research genomic dna samples from six ebv-transformed b-lymphocyte cell lines
Flowchart and overview of DMRforPairs results of the Illumina data. (A) The subsequent steps of recoding probe classes, identifying regions, quantifying and testing methylation differences and exporting the results are described in detail in the main text. Briefly, 473,151 probes remained after quality control. Subsequently, probes not associated to any of the 11 classes or not included in any of the regions are discarded. 145,537 probes (35%) were included in 29,404 potential regions of interest. Finally, these were assessed for methylation differences. (B) Number of regions identified in the various pairwise analyses. * = relevant indicates regions with |ΔM| > 1.4, ** = significant indicates relevant + p adjusted ≤ 0.05. “repl.” indicates technical replicates. (C,D) The density plots illustrate the distribution of all/the relevant/the significant regions with regard to the number of probes in each region. Only the comparisons of the two cancer cell lines (C) and the pair of <t>lymphoblastoid</t> cell lines (D) are depicted as the technical replicates yielded no significant DMRs.
Genomic Dna Samples From Six Ebv Transformed B Lymphocyte Cell Lines, supplied by Coriell Institute for Medical Research, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/genomic dna samples from six ebv-transformed b-lymphocyte cell lines/product/Coriell Institute for Medical Research
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Image Search Results


Flowchart and overview of DMRforPairs results of the Illumina data. (A) The subsequent steps of recoding probe classes, identifying regions, quantifying and testing methylation differences and exporting the results are described in detail in the main text. Briefly, 473,151 probes remained after quality control. Subsequently, probes not associated to any of the 11 classes or not included in any of the regions are discarded. 145,537 probes (35%) were included in 29,404 potential regions of interest. Finally, these were assessed for methylation differences. (B) Number of regions identified in the various pairwise analyses. * = relevant indicates regions with |ΔM| > 1.4, ** = significant indicates relevant + p adjusted ≤ 0.05. “repl.” indicates technical replicates. (C,D) The density plots illustrate the distribution of all/the relevant/the significant regions with regard to the number of probes in each region. Only the comparisons of the two cancer cell lines (C) and the pair of lymphoblastoid cell lines (D) are depicted as the technical replicates yielded no significant DMRs.

Journal: BMC Bioinformatics

Article Title: DMRforPairs: identifying Differentially Methylated Regions between unique samples using array based methylation profiles

doi: 10.1186/1471-2105-15-141

Figure Lengend Snippet: Flowchart and overview of DMRforPairs results of the Illumina data. (A) The subsequent steps of recoding probe classes, identifying regions, quantifying and testing methylation differences and exporting the results are described in detail in the main text. Briefly, 473,151 probes remained after quality control. Subsequently, probes not associated to any of the 11 classes or not included in any of the regions are discarded. 145,537 probes (35%) were included in 29,404 potential regions of interest. Finally, these were assessed for methylation differences. (B) Number of regions identified in the various pairwise analyses. * = relevant indicates regions with |ΔM| > 1.4, ** = significant indicates relevant + p adjusted ≤ 0.05. “repl.” indicates technical replicates. (C,D) The density plots illustrate the distribution of all/the relevant/the significant regions with regard to the number of probes in each region. Only the comparisons of the two cancer cell lines (C) and the pair of lymphoblastoid cell lines (D) are depicted as the technical replicates yielded no significant DMRs.

Article Snippet: As a proof of concept, DMRforPairs is applied to a public dataset including two commercially available EBV transfected lymphoblastoid cell lines from healthy individuals (NA17105 (African American male) and NA17018 (Chinese female), Coriell Institute for Medical Research (NJ, USA) ( http://ccr.coriell.org/ )).

Techniques: Methylation, Control